Basic Information
Locus ID:
populus_peu01063
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 19062366 | 19071271 | - | populus_peu01063 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 72,554.54 Da | 47.94 | 77.35 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 528 | 642 | 3.8E-11 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 331 | 524 | 2.66E-22 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 527 | 644 | 4.3E-18 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 524 | 651 | 1.9E-29 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 96 | 149 | 3.8E-6 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 323 | 408 | 5.9E-7 | - |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 322 | 651 | 130.75386 | IPR030380 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 527 | 652 | 20.760374 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 55 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_011047344.1 | PREDICTED: DNA (cytosine-5)-methyltransferase DRM1 isoform X1 [Populus euphratica] | 0 |
| Q9M548 | DNA (cytosine-5)-methyltransferase DRM2 OS=Arabidopsis thaliana OX=3702 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | B9GI45 | SAM-dependent MTase DRM-type domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G347000 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology