Basic Information
Locus ID:
populus_peu01055
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 18978012 | 18981612 | - | populus_peu01055 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.26 | 73,525.98 Da | 36.53 | 87.11 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 334 | 598 | 8.01619E-89 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 188 | 244 | 1.2E-8 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 58 | 137 | 1.0E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 331 | 596 | 5.6E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 312 | 628 | 1.75E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 404 | 603 | 1.3E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 289 | 403 | 5.0E-29 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 165 | 247 | 5.9E-10 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 49 | 139 | 9.6E-16 | IPR038408 |
| SMART | SM00220 | serkin_6 | 328 | 596 | 1.6E-28 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 41 | 139 | 14.949993 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 146 | 247 | 12.77749 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 328 | 597 | 35.113815 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 449 | 461 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 630 | 665 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_011047329.1 | PREDICTED: cysteine-rich receptor-like protein kinase 42 [Populus euphratica] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T2ZQZ7 | Cysteine-rich receptor-like protein kinase 42 OS=Populus deltoides OX=3696 GN=H0E87_000846 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology