Basic Information
Locus ID:
populus_peu00806
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
AFB3
Description:
Protein AUXIN SIGNALING F-BOX
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 14281161 | 14283679 | + | populus_peu00806 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 48,357.98 Da | 44.73 | 102.24 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 40 | 56 | 1.6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 3 | 393 | 4.91E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 433 | 1.1E-137 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 336 | 361 | 120.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 256 | 280 | 24.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 15 | 40 | 5.6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 200 | 223 | 270.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 174 | 199 | 33.0 | IPR006553 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26810.1 | auxin signaling F-box 2. | 0 |
| RefSeq | XP_011009720.1 | PREDICTED: protein AUXIN SIGNALING F-BOX 2-like [Populus euphratica] | 0 |
| Q9LW29 | Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana OX=3702 GN=AFB2 PE=1 SV=1 | 0 | |
| TrEMBL | B9N0V8 | F-box domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G061600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology