Basic Information
Locus ID:
populus_peu00647
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 10145529 | 10150360 | + | populus_peu00647 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.36 | 55,848.30 Da | 59.42 | 56.94 | -0.83 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 396 | 453 | 1.3E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 218 | 273 | 7.8E-26 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 215 | 275 | 1.96E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 387 | 455 | 1.83E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 380 | 456 | 2.0E-36 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 205 | 276 | 3.4E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 395 | 454 | 8.1E-40 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 216 | 274 | 1.7E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 390 | 455 | 38.641026 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 211 | 275 | 25.028828 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 475 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 365 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 476 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 364 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_011035813.1 | PREDICTED: probable WRKY transcription factor 3 [Populus euphratica] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4U5QNL2 | Putative WRKY transcription factor 3 OS=Populus alba OX=43335 GN=D5086_0000063590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology