Basic Information
Locus ID:
populus_peu00619
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 9541246 | 9543765 | + | populus_peu00619 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 65,670.92 Da | 40.75 | 94.67 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 3 | 38 | 4.0E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 145 | 385 | 1.33E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 2 | 44 | 3.01E-9 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 98 | 428 | 2.1E-9 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 51 | 10.133335 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41840.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_006370196.3 | putative F-box/LRR-repeat protein At3g28410 isoform X1 [Populus trichocarpa] | 0 |
| Q9FJ30 | Putative F-box/LRR-repeat protein At5g41840 OS=Arabidopsis thaliana OX=3702 GN=At5g41840 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3N7EJE3 | F-box domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G395000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology