Basic Information
Locus ID:
populus_peu00503
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
11S globulin seed storage protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 6875303 | 6876988 | - | populus_peu00503 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 39,103.35 Da | 37.89 | 86.92 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 202 | 357 | 1.82955E-70 | - |
| CDD | cd02242 | cupin_11S_legumin_N | 4 | 177 | 1.13663E-65 | - |
| Pfam | PF00190 | Cupin | 12 | 160 | 1.2E-21 | IPR006045 |
| Pfam | PF00190 | Cupin | 206 | 340 | 9.9E-21 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 12 | 347 | 3.2E-43 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 10 | 176 | 5.1E-34 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 198 | 360 | 3.6E-46 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 3 | 161 | 3.6E-30 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 194 | 343 | 2.6E-24 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 262 | 278 | 1.8E-11 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 298 | 316 | 1.8E-11 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 280 | 295 | 1.8E-11 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 215 | 235 | 1.8E-11 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07750.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_011042473.1 | PREDICTED: glutelin type-A 3-like isoform X2 [Populus euphratica] | 0 |
| TrEMBL | A9P9T4 | 11S globulin seed storage protein 2-like OS=Populus trichocarpa OX=3694 GN=POPTR_001G402600 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology