Basic Information
Locus ID:
populus_peu00498
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
11S globulin seed storage protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 6823879 | 6826805 | - | populus_peu00498 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 41,129.70 Da | 40.98 | 89.79 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 233 | 376 | 3.45069E-63 | - |
| CDD | cd02242 | cupin_11S_legumin_N | 31 | 204 | 5.4238E-68 | - |
| Pfam | PF00190 | Cupin | 39 | 187 | 4.6E-21 | IPR006045 |
| Pfam | PF00190 | Cupin | 230 | 360 | 3.8E-16 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 38 | 367 | 9.19E-39 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 223 | 379 | 1.8E-42 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 35 | 203 | 4.9E-34 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 30 | 188 | 9.7E-31 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 221 | 362 | 3.3E-16 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 317 | 335 | 1.1E-11 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 299 | 314 | 1.1E-11 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 234 | 254 | 1.1E-11 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 281 | 297 | 1.1E-11 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_011042471.1 | PREDICTED: glutelin type-A 3-like isoform X2 [Populus euphratica] | 0 |
| TrEMBL | A9P9T4 | 11S globulin seed storage protein 2-like OS=Populus trichocarpa OX=3694 GN=POPTR_001G402600 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology