Basic Information
Locus ID:
populus_peu00491
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
11S globulin seed storage protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 6719472 | 6721751 | - | populus_peu00491 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 42,126.54 Da | 39.43 | 88.89 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 229 | 384 | 1.11818E-66 | - |
| CDD | cd02242 | cupin_11S_legumin_N | 31 | 204 | 3.06398E-70 | - |
| Pfam | PF00190 | Cupin | 233 | 367 | 1.8E-19 | IPR006045 |
| Pfam | PF00190 | Cupin | 41 | 187 | 4.7E-22 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 34 | 375 | 2.57E-43 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 225 | 387 | 4.3E-44 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 18 | 201 | 5.1E-35 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 221 | 370 | 2.1E-19 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 30 | 188 | 2.0E-30 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 307 | 322 | 2.9E-9 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 325 | 343 | 2.9E-9 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 289 | 305 | 2.9E-9 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 242 | 262 | 2.9E-9 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07750.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_011042470.1 | PREDICTED: glutelin type-A 3-like isoform X1 [Populus euphratica] | 0 |
| TrEMBL | A9P9T4 | 11S globulin seed storage protein 2-like OS=Populus trichocarpa OX=3694 GN=POPTR_001G402600 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology