Basic Information
Locus ID:
populus_peu00063
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
heat shock
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 612474 | 614303 | - | populus_peu00063 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.78 | 35,020.71 Da | 38.41 | 87.99 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00183 | Hsp90 protein | 68 | 298 | 1.3E-94 | IPR001404 |
| Pfam | PF00183 | Hsp90 protein | 1 | 66 | 2.8E-32 | IPR001404 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 1 | 127 | 2.43E-44 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 151 | 272 | 6.41E-39 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 1 | 54 | 4.4E-26 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 131 | 276 | 2.0E-67 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 55 | 130 | 5.7E-28 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 308 | - | - |
| Coils | Coil | Coil | 131 | 151 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56030.1 | heat shock protein 81-2. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c. | 0 |
| RefSeq | XP_011039800.1 | PREDICTED: heat shock protein 90-2 [Populus euphratica] | 0 |
| P36181 | Heat shock cognate protein 80 OS=Solanum lycopersicum OX=4081 GN=HSC80 PE=2 SV=1 | 0 | |
| TrEMBL | B9GH22 | HATPase_c domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G466000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology