Basic Information
Locus ID:
pistato.v30292770
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_357 | 161102 | 162442 | + | pistato.v30292770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 16,197.26 Da | 76.08 | 62.63 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 44 | 122 | 1.8E-12 | IPR002902 |
| Gene3D | G3DSA:3.30.430.20 | - | 35 | 125 | 4.5E-21 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 31 | 139 | 15.112931 | IPR002902 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 139 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11460.2 | - | 0 |
| RefSeq | XP_031268738.1 | putative receptor-like protein kinase At4g00960 [Pistacia vera] | 0 |
| Q9LDT0 | Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana OX=3702 GN=CRK30 PE=3 SV=1 | 0 | |
| TrEMBL | A0A251IXY7 | Cysteine-rich receptor-like protein kinase 25 OS=Manihot esculenta OX=3983 GN=MANES_16G014600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 21 | pistato.v30128710, pistato.v30173520, pistato.v30173530 ... |
| Brassicaceae | Brassica nigra | 1 | BniB07g024080.2N |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG12.589, evm.TU.LG12.599 |