Basic Information
Locus ID:
pistato.v30292740
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_357 | 47866 | 49158 | - | pistato.v30292740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 24,949.26 Da | 49.35 | 93.99 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 96 | 186 | 1.4E-6 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 22 | 93 | 1.6E-11 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 208 | 6.25E-33 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 93 | 8.2E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 94 | 193 | 1.0E-10 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 20 | 223 | 11.269758 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 26 | 48 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 12. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_031268852.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Pistacia vera] | 0 |
| O65472 | Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana OX=3702 GN=CRK12 PE=3 SV=3 | 0 | |
| TrEMBL | A0A2H5N0P1 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_282180 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 6 | pistato.v30120660, pistato.v30120670, pistato.v30120700 ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G1514 |
| Poaceae | Oryza coarctata | 1 | Oco02G022610 |