Basic Information
Locus ID:
pistato.v30292730
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_357 | 16265 | 18505 | - | pistato.v30292730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.27 | 30,881.87 Da | 42.45 | 93.92 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 87 | 155 | 9.2E-11 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 230 | 276 | 5.2E-11 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 69 | 192 | 2.14E-24 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 231 | 278 | 3.2E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 57 | 156 | 9.9E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 157 | 230 | 1.8E-9 | - |
| SMART | SM00219 | tyrkin_6 | 84 | 238 | 1.7E-4 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 84 | 278 | 20.569929 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 90 | 112 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65790.1 | receptor kinase 1. An alternatively spliced gene that encodes a functional transmembrane receptor serine/threonine kinase, alternate form may not have transmembrane domain. | 0 |
| RefSeq | XP_031247370.1 | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 [Pistacia vera] | 0 |
| Q39086 | Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana OX=3702 GN=SD17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5N0P1 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_282180 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 6 | pistato.v30120660, pistato.v30120670, pistato.v30120700 ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G1514 |
| Poaceae | Oryza coarctata | 1 | Oco02G022610 |