Basic Information
Locus ID:
pistato.v30291980
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_220 | 471742 | 481225 | - | pistato.v30291980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 208,690.20 Da | 40.40 | 101.17 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 163 | 411 | 1.1E-31 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 486 | 880 | 1.67E-22 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 905 | 1251 | 4.76E-15 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 155 | 425 | 2.08E-42 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 1566 | 1784 | 3.69E-8 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1357 | 1611 | 2.04E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 902 | 1063 | 3.7E-10 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 145 | 326 | 1.4E-30 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1313 | 1557 | 1.6E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 518 | 901 | 3.8E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 328 | 413 | 6.3E-12 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1611 | 1804 | 3.0E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1079 | 1266 | 1.9E-5 | IPR032675 |
| SMART | SM00382 | AAA_5 | 177 | 330 | 4.3E-5 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 954 | 970 | 7.2E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 180 | 195 | 7.2E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 254 | 268 | 7.2E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 358 | 372 | 7.2E-18 | - |
| Coils | Coil | Coil | 38 | 65 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031275032.1 | uncharacterized protein LOC116133468 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HQ30 | AAA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_016970 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology