Basic Information
Locus ID:
pistato.v30291960
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_220 | 442749 | 459152 | - | pistato.v30291960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 210,209.23 Da | 43.28 | 107.58 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 255 | 358 | 0.0030576 | - |
| Pfam | PF00931 | NB-ARC domain | 257 | 505 | 1.8E-35 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 579 | 983 | 2.89E-24 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 241 | 519 | 2.28E-44 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 1007 | 1321 | 7.14E-10 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1340 | 1608 | 7.77E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 999 | 1166 | 1.2E-8 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 419 | 506 | 1.5E-15 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 593 | 998 | 7.6E-32 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 240 | 418 | 3.2E-28 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1279 | 1610 | 3.4E-12 | IPR032675 |
| SMART | SM00382 | AAA_5 | 267 | 548 | 7.2E-4 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 453 | 467 | 1.5E-21 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 343 | 357 | 1.5E-21 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 731 | 747 | 1.5E-21 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 270 | 285 | 1.5E-21 | - |
| Coils | Coil | Coil | 129 | 149 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031272218.1 | uncharacterized protein LOC116130624 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HQ30 | AAA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_016970 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology