Basic Information
Locus ID:
pistato.v30286040
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1232 | 23372 | 32660 | + | pistato.v30286040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 175,148.69 Da | 38.85 | 104.98 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 161 | 395 | 4.8E-46 | IPR002182 |
| Pfam | PF00931 | NB-ARC domain | 1007 | 1240 | 2.0E-42 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 160 | 409 | 5.62E-49 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 991 | 1254 | 5.64E-47 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 1313 | 1528 | 5.65E-20 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 470 | 865 | 9.35E-32 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 308 | 392 | 2.0E-16 | IPR042197 |
| Gene3D | G3DSA:1.10.8.430 | - | 1154 | 1243 | 4.9E-14 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1351 | 1541 | 2.1E-25 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 146 | 306 | 6.4E-31 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 475 | 664 | 8.5E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 673 | 914 | 5.1E-7 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 993 | 1149 | 4.8E-32 | IPR027417 |
| SMART | SM00382 | AAA_5 | 1019 | 1154 | 3.7E-6 | IPR003593 |
| SMART | SM00382 | AAA_5 | 173 | 319 | 0.48 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 1462 | 1478 | 5.6E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1095 | 1109 | 5.6E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1188 | 1202 | 5.6E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1022 | 1037 | 5.6E-20 | - |
| Coils | Coil | Coil | 882 | 916 | - | - |
| Coils | Coil | Coil | 30 | 68 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031276449.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7I800 | NB-ARC domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_006978 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology