Basic Information
Locus ID:
pistato.v30286030
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1232 | 597 | 10605 | + | pistato.v30286030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 239,076.73 Da | 39.15 | 102.78 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 1369 | 1603 | 2.1E-45 | IPR002182 |
| Pfam | PF00931 | NB-ARC domain | 79 | 291 | 2.9E-42 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1368 | 1617 | 2.24E-48 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 1678 | 2073 | 2.38E-31 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 645 | 820 | 1.02E-6 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 971 | 1180 | 2.98E-15 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 65 | 326 | 1.31E-46 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 387 | 1042 | 2.99E-30 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 226 | 315 | 3.3E-15 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 55 | 220 | 1.1E-29 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 1516 | 1599 | 2.4E-16 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 801 | 953 | 7.3E-7 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 1354 | 1514 | 1.1E-30 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1710 | 2083 | 6.6E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1048 | 1195 | 2.2E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 408 | 582 | 7.4E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 954 | 1047 | 7.1E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 583 | 800 | 8.6E-12 | IPR032675 |
| SMART | SM00382 | AAA_5 | 91 | 230 | 0.0036 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1381 | 1527 | 0.36 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 1827 | 1843 | 1.9E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1384 | 1399 | 1.9E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1457 | 1471 | 1.9E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1550 | 1564 | 1.9E-18 | - |
| Coils | Coil | Coil | 1238 | 1276 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031276401.1 | probable disease resistance protein At4g27220 isoform X1 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2MET8 | AAA domain-containing protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS358158 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology