Basic Information
Locus ID:
pistato.v30285770
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_12 | 5252014 | 5255562 | - | pistato.v30285770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.29 | 45,091.17 Da | 35.59 | 95.25 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 49 | 365 | 2.63975E-98 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 46 | 363 | 1.6E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 19 | 363 | 3.68E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 173 | 376 | 4.7E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 125 | 1.8E-33 | - |
| SMART | SM00220 | serkin_6 | 43 | 363 | 3.4E-17 | IPR000719 |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 47 | 132 | 0.35 | - |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 177 | 408 | 8.6E-12 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 43 | 374 | 36.852299 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 215 | 227 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 49 | 78 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 408 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09010.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_044480790.1 | putative serine/threonine-protein kinase [Mangifera indica] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J4ZIQ8 | Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_017685 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg20327, jg22011, jg24858, jg3271 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22259 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah017986 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g183590 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg10009, Sbi_jg10010, Sbi_jg26243, Sbi_jg6639 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg15293, Seu_jg22348 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00027926 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl45891, Sgl50591 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000011634, gene:ENSEOMG00000034253 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8AG0004850 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30073430, pistato.v30285770 |
| Apiaceae | Apium graveolens | 5 | Ag5G01340, Ag6G01000, Ag7G00719, Ag8G00097, Ag8G00931 |
| Arecaceae | Cocos nucifera | 3 | COCNU_04G000300, COCNU_07G012630, COCNU_09G007080 |
| Arecaceae | Phoenix dactylifera | 4 | gene-LOC103704027, gene-LOC103716187, gene-LOC103721119 ... |
| Asparagaceae | Asparagus officinalis | 4 | AsparagusV1_01.929.V1.1, AsparagusV1_04.3353.V1.1 ... |
| Asteraceae | Flaveria trinervia | 5 | Ftri11G23531, Ftri12G31248, Ftri15G04050, Ftri18G20101 ... |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G09010.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10020896m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g07430.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB07g024470.2N, BniB07g058430.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G2314 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl01G2626, Cgl08G1054 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate01g06410, gene.Thate08g01020 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-3470, nbisL1-mrna-8652 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG01.1037, evm.TU.LG12.981 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00002765, Pov_00005756, Pov_00026928 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb1G00090, Lb3G18508, Lb4G24651 |
| Poaceae | Echinochloa crus-galli | 8 | AH01.4253, AH07.2763, AH09.2723, BH01.4558, BH07.2571 ... |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_2BG0194410, gene-QOZ80_3AG0242110 ... |
| Poaceae | Hordeum vulgare | 4 | HORVU.MOREX.r3.2HG0209330.1, HORVU.MOREX.r3.4HG0389790.1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_023923, gene-QYE76_069116 |
| Poaceae | Oryza coarctata | 6 | Oco03G016340, Oco04G017070, Oco05G008930, Oco06G009300 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os02g42620.1, LOC_Os03g15770.2, LOC_Os04g58250.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_01G408000, gene-BS78_04G207800 ... |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0102178, Pt_Chr0102194, Pt_Chr0300089, Pt_Chr0307117 |
| Poaceae | Sporobolus alterniflorus | 10 | Chr01G030450, Chr04G007280, Chr06G006630, Chr07G004370 ... |
| Poaceae | Thinopyrum elongatum | 4 | Tel2E01G967900, Tel4E01G376200, Tel6E01G448300 ... |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC2AG078220, gene_TRIDC2BG086190 ... |
| Poaceae | Triticum aestivum | 11 | TraesCS2A02G589900.1, TraesCS2B02G594100.1 ... |
| Poaceae | Zea mays | 4 | Zm00001eb011650_P002, Zm00001eb066010_P001 ... |
| Poaceae | Zoysia japonica | 5 | nbis-gene-2156, nbis-gene-23214, nbis-gene-3815 ... |
| Poaceae | Zoysia macrostachya | 4 | Zma_g13976, Zma_g1575, Zma_g22237, Zma_g3972 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.1611, evm.TU.LG14.860 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g14680 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_13_RagTag.220, evm.TU.Scaffold_1_RagTag.1797 ... |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-29495, nbisL1-mrna-4549, nbisL1-mrna-5590 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-1400, nbisL1-mrna-2405 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-20899, nbisL1-mrna-3712, nbisL1-mrna-9571 |
| Rhizophoraceae | Kandelia candel | 3 | evm.TU.utg000009l.1028, evm.TU.utg000015l.132 ... |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00004984, Maker00015456, Maker00016615 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-2694, nbisL1-mrna-4967, nbisL1-mrna-5966 |
| Rhizophoraceae | Rhizophora mangle | 3 | nbisL1-mrna-13750, nbisL1-mrna-16702, nbisL1-mrna-16901 |
| Salicaceae | Populus euphratica | 2 | populus_peu10092, populus_peu18211 |
| Solanaceae | Lycium barbarum | 4 | gene-LOC132606802, gene-LOC132617110, gene-LOC132622315 ... |
| Solanaceae | Solanum chilense | 4 | SOLCI004894300, SOLCI005664200, SOLCI006391300 ... |
| Solanaceae | Solanum pennellii | 4 | gene-LOC107009494, gene-LOC107012400, gene-LOC107029545 ... |
| Tamaricaceae | Reaumuria soongarica | 3 | STRG.22271_chr09_-, gene_16700, gene_6870 |
| Tamaricaceae | Tamarix chinensis | 3 | TC07G0297, TC07G1275, TC07G2161 |