Basic Information
Locus ID:
pistato.v30285450
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Mitogen-activated protein kinase-binding protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_12 | 4899455 | 4907394 | + | pistato.v30285450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 132,856.78 Da | 46.51 | 82.23 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 106 | 138 | 0.0052 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 147 | 181 | 0.0095 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 689 | 718 | 0.062 | IPR001680 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 69 | 588 | 2.31E-33 | - |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 460 | 719 | 1.56E-45 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 224 | 436 | 4.4E-12 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 437 | 607 | 1.8E-26 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 26 | 219 | 3.4E-33 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 608 | 797 | 5.3E-17 | IPR015943 |
| SMART | SM00320 | WD40_4 | 102 | 139 | 3.4E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 449 | 487 | 2.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 595 | 633 | 16.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 489 | 542 | 0.0076 | IPR001680 |
| SMART | SM00320 | WD40_4 | 56 | 99 | 410.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 636 | 677 | 0.95 | IPR001680 |
| SMART | SM00320 | WD40_4 | 680 | 719 | 7.0E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 377 | 415 | 61.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 142 | 182 | 0.14 | IPR001680 |
| SMART | SM00320 | WD40_4 | 319 | 353 | 10.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 546 | 585 | 3.1E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 687 | 718 | 9.773251 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1194 | 1220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 868 | 887 | - | - |
| Coils | Coil | Coil | 1098 | 1118 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09080.4 | - | 0 |
| RefSeq | XP_031276141.1 | mitogen-activated protein kinase-binding protein 1 [Pistacia vera] | 0 |
| Q8HXL3 | WD repeat-containing protein 62 OS=Sus scrofa OX=9823 GN=WDR62 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5C7HNU5 | Mitogen-activated protein kinase-binding protein 1 OS=Acer yangbiense OX=1000413 GN=EZV62_016586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg14799 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30285450 |
| Apiaceae | Apium graveolens | 1 | Ag5G02363 |
| Asteraceae | Flaveria trinervia | 1 | Ftri3G25194 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G09080.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10022253m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g07530.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB07g058390.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G1051 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl08G1076, Cgl08G1077 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.1010s00004.v1.0 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.1069 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00006461 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G09988 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1767 |
| Salicaceae | Populus euphratica | 1 | populus_peu11401 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132630690 |
| Solanaceae | Solanum chilense | 1 | SOLCI000172200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107029641 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_4371 |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G1795 |