Basic Information
Locus ID:
pistato.v30284020
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_12 | 3175905 | 3179070 | + | pistato.v30284020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.03 | 88,052.78 Da | 56.34 | 75.75 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 12 | 157 | 1.14239E-59 | - |
| Pfam | PF00582 | Universal stress protein family | 13 | 132 | 8.4E-9 | IPR006016 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 479 | 735 | 1.4E-39 | IPR001245 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 13 | 153 | 7.62E-11 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 459 | 735 | 6.66E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 549 | 751 | 1.4E-47 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 11 | 154 | 5.7E-11 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 455 | 548 | 1.8E-25 | - |
| SMART | SM00220 | serkin_6 | 476 | 739 | 1.6E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 476 | 739 | 35.19862 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 594 | 606 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 750 | 792 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 751 | 773 | - | - |
| Coils | Coil | Coil | 348 | 368 | - | - |
| Coils | Coil | Coil | 424 | 445 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31230.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_031268174.1 | U-box domain-containing protein 52-like [Pistacia vera] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J0ZMN6 | U-box domain-containing protein 35-like OS=Herrania umbratica OX=108875 GN=LOC110410235 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology