Basic Information
Locus ID:
pistato.v30282540
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1161 | 31348 | 32637 | + | pistato.v30282540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 37,462.06 Da | 56.61 | 93.01 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 39 | 74 | 3.0E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 71 | 185 | 1.11E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 39 | 75 | 6.41E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 73 | 188 | 8.5E-10 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 32 | 79 | 9.656436 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01620.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_031271706.1 | F-box protein SKIP28-like [Pistacia vera] | 0 |
| Q9ZU90 | F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1 | 0 | |
| TrEMBL | V4U659 | F-box domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10015846mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology