Basic Information
Locus ID:
pistato.v30280980
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
AAA-type ATPase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 29714788 | 29715455 | + | pistato.v30280980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 22,981.07 Da | 47.65 | 99.71 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16193 | AAA C-terminal domain | 112 | 205 | 1.3E-15 | IPR032423 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 6 | 142 | 6.08E-14 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 5 | 92 | 4.6E-10 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 93 | 160 | 3.8E-7 | - |
| Coils | Coil | Coil | 151 | 171 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24290.1 | AAA-type ATPase family protein. | 0 |
| RefSeq | XP_031287010.1 | ATPase WRNIP1-like [Pistacia vera] | 0 |
| Q75JU2 | ATPase WRNIP1 OS=Dictyostelium discoideum OX=44689 GN=wrnip1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5C7HLR4 | UBA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_015548 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 3 | pistato.v30280790, pistato.v30280820, pistato.v30280980 |