halophFGD

Basic Information

Locus ID: pistato.v30280820

Species & Taxonomic ID: Pistacia vera & 55513

Genome Assembly: GWHBKLD00000000

Description: AAA-type ATPase family protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9	29567148	29568196	+	pistato.v30280820

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.64	33,005.54 Da	47.28	95.67	-0.03

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd18139	HLD_clamp_RarA	203	293	4.52506E-7	-
Pfam	PF16193	AAA C-terminal domain	217	304	8.2E-12	IPR032423
SUPERFAMILY	SSF46934	UBA-like	1	39	6.38E-8	IPR009060
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	84	262	2.87E-20	IPR027417
Gene3D	G3DSA:1.10.8.10	-	1	37	2.6E-8	-
Gene3D	G3DSA:3.40.50.300	-	148	197	1.7E-9	IPR027417
Gene3D	G3DSA:3.40.50.300	-	74	147	1.9E-7	IPR027417
Gene3D	G3DSA:1.10.8.60	-	198	264	1.0E-9	-
ProSiteProfiles	PS50030	Ubiquitin-associated domain (UBA) profile.	1	36	10.956485	IPR015940
Coils	Coil	Coil	256	276	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K07478 (putative ATPase)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT1G24290.1	AAA-type ATPase family protein.	0
RefSeq	XP_031287010.1	ATPase WRNIP1-like [Pistacia vera]	0
Swiss-Prot	P45262	Replication-associated recombination protein A OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rarA PE=3 SV=1	0
TrEMBL	A0A2H5MX07	UBA domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_003000 PE=3 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Anacardiaceae	Pistacia vera	3	pistato.v30280790, pistato.v30280820, pistato.v30280980