Basic Information
Locus ID:
pistato.v30276960
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 22007130 | 22010630 | + | pistato.v30276960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.63 | 50,083.23 Da | 44.82 | 53.72 | -0.95 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 247 | 330 | 2.5E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 222 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 38 | - | - |
| Coils | Coil | Coil | 262 | 292 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_031248259.1 | protein WVD2-like 4 [Pistacia vera] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | V4UUE1 | TPX2 domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10012108mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology