Basic Information
Locus ID:
pistato.v30274410
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 9956564 | 9961637 | - | pistato.v30274410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 63,158.70 Da | 39.81 | 76.39 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 36 | 493 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 319 | 493 | 4.7E-19 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 47 | 186 | 1.1E-19 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 43 | 508 | 7.49E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 130 | 494 | 2.0E-73 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 23 | 129 | 1.0E-40 | - |
| SMART | SM00220 | serkin_6 | 47 | 493 | 5.9E-49 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 47 | 493 | 29.488483 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 53 | 76 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 174 | 186 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 515 | 532 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 563 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 542 | 563 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_031287406.1 | SRSF protein kinase 2-like [Pistacia vera] | 0 |
| Q9UPE1 | SRSF protein kinase 3 OS=Homo sapiens OX=9606 GN=SRPK3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5C7HQ74 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_016201 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology