Basic Information
Locus ID:
pistato.v30266570
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 26743362 | 26749272 | - | pistato.v30266570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 116,009.52 Da | 40.13 | 80.84 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 32 | 150 | 1.43214E-17 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 801 | 869 | 3.9E-9 | IPR001480 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 550 | 583 | 9.3E-7 | IPR001245 |
| Pfam | PF00954 | S-locus glycoprotein domain | 209 | 312 | 4.6E-6 | IPR000858 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 478 | 546 | 1.8E-9 | IPR001245 |
| Pfam | PF01453 | D-mannose binding lectin | 69 | 176 | 1.4E-28 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 983 | 1019 | 2.4E-8 | IPR003609 |
| Pfam | PF08276 | PAN-like domain | 337 | 369 | 4.0E-6 | IPR003609 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 458 | 670 | 3.46E-36 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 800 | 929 | 9.15E-12 | IPR036426 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 60 | 215 | 7.97E-19 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 433 | 546 | 1.5E-35 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 13 | 148 | 2.4E-13 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 547 | 662 | 6.0E-13 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 768 | 874 | 2.4E-5 | IPR036426 |
| SMART | SM00108 | blect_4 | 19 | 151 | 2.3E-20 | IPR001480 |
| SMART | SM00108 | blect_4 | 777 | 873 | 0.0081 | IPR001480 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 746 | 876 | 8.847385 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 964 | 1032 | 7.337243 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 19 | 144 | 12.261648 | IPR001480 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16030.1 | lectin protein kinase family protein. | 0 |
| RefSeq | XP_031287090.1 | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 [Pistacia vera] | 0 |
| Q9LW83 | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana OX=3702 GN=CES101 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1U8Q349 | LOW QUALITY PROTEIN: uncharacterized protein LOC104592220 OS=Nelumbo nucifera OX=4432 GN=LOC104592220 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 6 | jg18161, jg18162, jg18163, jg18164, jg18165, jg23599 |
| Anacardiaceae | Pistacia vera | 10 | pistato.v30014320, pistato.v30036750, pistato.v30036760 ... |
| Apiaceae | Apium graveolens | 1 | AgUnG01050 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G18470.1 |
| Brassicaceae | Brassica nigra | 3 | BniB05g045300.2N, BniB08g009250.2N, BniB08g009270.2N |
| Plantaginaceae | Plantago ovata | 4 | Pov_00016931, Pov_00029256, Pov_00029257, Pov_00041214 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG02.1374, evm.TU.LG02.1375, evm.TU.LG09.595 ... |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_1_RagTag.347, evm.TU.Scaffold_8_RagTag.280 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-3277 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-3165 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-13833 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-21937 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-16308 |
| Salicaceae | Populus euphratica | 5 | populus_peu00251, populus_peu00252, populus_peu00253 ... |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132635386, gene-LOC132637212 |