Basic Information
Locus ID:
pistato.v30266260
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 25590380 | 25593697 | + | pistato.v30266260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 72,232.02 Da | 38.20 | 90.42 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 12 | 268 | 7.2E-8 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 302 | 557 | 1.73E-24 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 10 | 273 | 2.88E-32 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 7 | 275 | 3.4E-30 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 291 | 334 | 3.9E-5 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 338 | 558 | 8.2E-22 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 303 | 557 | 10.870441 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 1 | 275 | 17.934929 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58050.1 | SHV3-like 4. | 0 |
| RefSeq | XP_031266324.1 | glycerophosphodiester phosphodiesterase GDPDL7-like [Pistacia vera] | 0 |
| Q9FGT9 | Glycerophosphodiester phosphodiesterase GDPDL6 OS=Arabidopsis thaliana OX=3702 GN=GDPDL6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HV34 | glycerophosphodiester phosphodiesterase OS=Acer yangbiense OX=1000413 GN=EZV62_012143 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology