Basic Information
Locus ID:
pistato.v30266070
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Glyco_18
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 25227565 | 25228814 | - | pistato.v30266070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.74 | 44,135.49 Da | 26.54 | 71.37 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02879 | GH18_plant_chitinase_class_V | 63 | 383 | 5.83339E-126 | - |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 66 | 371 | 9.0E-74 | IPR001223 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 283 | 348 | 5.24E-12 | IPR029070 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 62 | 378 | 4.7E-61 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 64 | 378 | 1.8E-105 | - |
| Gene3D | G3DSA:3.10.50.10 | - | 282 | 348 | 1.8E-105 | IPR029070 |
| SMART | SM00636 | 2g34 | 33 | 377 | 5.2E-76 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 46 | 399 | 51.927872 | IPR001223 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_031272543.1 | class V chitinase-like [Pistacia vera] | 0 |
| O81862 | Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0ZNV3 | chitotriosidase-1-like OS=Herrania umbratica OX=108875 GN=LOC110410693 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology