Basic Information
Locus ID:
pistato.v30261650
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Translocase of chloroplast 90
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 15437602 | 15441734 | - | pistato.v30261650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.30 | 89,276.81 Da | 45.78 | 88.38 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 517 | 781 | 1.1E-116 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 173 | 321 | 4.2E-22 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 164 | 325 | 2.91E-19 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 150 | 393 | 2.5E-51 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 55 | 781 | 5.7E-212 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 169 | 399 | 27.732899 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 77 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_031250482.1 | translocase of chloroplast 90, chloroplastic [Pistacia vera] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7I0H0 | AIG1-type G domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_013255 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology