Basic Information
Locus ID:
pistato.v30261280
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 14631692 | 14634716 | + | pistato.v30261280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 82,705.86 Da | 47.72 | 78.75 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 432 | 692 | 7.85498E-88 | - |
| CDD | cd01989 | STK_N | 17 | 149 | 4.22497E-34 | - |
| Pfam | PF00069 | Protein kinase domain | 428 | 679 | 9.9E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 409 | 684 | 4.72E-67 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 19 | 146 | 2.18E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 394 | 498 | 8.3E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 499 | 707 | 4.7E-48 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 16 | 149 | 4.6E-5 | IPR014729 |
| SMART | SM00220 | serkin_6 | 426 | 689 | 1.1E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 426 | 689 | 35.665043 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 544 | 556 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 714 | 744 | - | - |
| Coils | Coil | Coil | 352 | 407 | - | - |
| Coils | Coil | Coil | 292 | 312 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_031250095.1 | U-box domain-containing protein 51-like [Pistacia vera] | 0 |
| Q9FKG5 | U-box domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=PUB51 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5C7HY79 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_013223 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology