Basic Information
Locus ID:
pistato.v30259480
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 10657287 | 10662670 | - | pistato.v30259480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 44,069.99 Da | 33.98 | 94.24 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 61 | 324 | 1.3E-118 | IPR013765 |
| SUPERFAMILY | SSF54752 | RecA protein, C-terminal domain | 326 | 381 | 6.28E-8 | IPR023400 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 59 | 324 | 1.19E-55 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 87 | 388 | 2.0E-110 | IPR027417 |
| SMART | SM00382 | AAA_5 | 111 | 285 | 5.2E-8 | IPR003593 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 58 | 380 | 2.9E-137 | IPR013765 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 89 | 248 | 36.823147 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 258 | 329 | 26.402866 | IPR020587 |
| ProSitePatterns | PS00321 | recA signature. | 270 | 278 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 147 | 176 | 3.4E-75 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 181 | 210 | 3.4E-75 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 353 | 370 | 3.4E-75 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 267 | 295 | 3.4E-75 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 300 | 329 | 3.4E-75 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 219 | 248 | 3.4E-75 | IPR013765 |
| Hamap | MF_00268 | Protein RecA [recA]. | 58 | 385 | 43.432537 | IPR013765 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 413 | - | - |
| Coils | Coil | Coil | 48 | 68 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19490.1 | recA DNA recombination family protein. | 0 |
| RefSeq | XP_031276806.1 | DNA repair protein recA homolog 3, mitochondrial isoform X2 [Pistacia vera] | 0 |
| Q9ZUP2 | DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6J1DMJ4 | DNA repair protein recA homolog 3, mitochondrial-like isoform X4 OS=Momordica charantia OX=3673 GN=LOC111021929 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology