Basic Information
Locus ID:
pistato.v30257300
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 6517369 | 6520550 | + | pistato.v30257300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 110,636.82 Da | 38.58 | 102.89 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 571 | 591 | 0.2 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 286 | 308 | 0.61 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 65 | 2.7E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 692 | 970 | 6.5E-43 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 524 | 538 | 1.6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 93 | 152 | 2.6E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 240 | 257 | 0.64 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 227 | 592 | 1.41E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 690 | 974 | 6.34E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 285 | 3.74E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 283 | 376 | 2.5E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 377 | 625 | 6.2E-60 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 662 | 769 | 4.6E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 770 | 988 | 3.9E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 177 | 7.3E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 178 | 282 | 5.1E-27 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 163 | 189 | 180.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 569 | 588 | 330.0 | - |
| SMART | SM00369 | LRR_typ_2 | 498 | 522 | 18.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 91 | 123 | 18.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 284 | 316 | 140.0 | - |
| SMART | SM00369 | LRR_typ_2 | 546 | 568 | 260.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 690 | 975 | 2.4E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 139 | 162 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 237 | 261 | 4.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 163 | 187 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 308 | 332 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 569 | 593 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 115 | 120.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 977 | 36.145599 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 826 | 838 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 696 | 719 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_031272236.1 | receptor-like protein kinase 5 [Pistacia vera] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | V4UQ05 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10007383mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology