Basic Information
Locus ID:
pistato.v30257250
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 6419613 | 6422793 | + | pistato.v30257250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 110,659.55 Da | 37.93 | 101.22 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 93 | 152 | 1.1E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 286 | 308 | 0.17 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 215 | 274 | 2.7E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 65 | 2.7E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 692 | 971 | 7.8E-45 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 286 | 592 | 4.08E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 685 | 974 | 5.4E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 347 | 5.44E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 178 | 5.0E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 377 | 5.8E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 179 | 283 | 2.9E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 378 | 624 | 1.3E-58 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 770 | 984 | 3.9E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 661 | 769 | 1.1E-19 | - |
| SMART | SM00365 | LRR_sd22_2 | 91 | 123 | 6.9 | - |
| SMART | SM00365 | LRR_sd22_2 | 163 | 189 | 180.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 237 | 258 | 390.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 284 | 316 | 130.0 | - |
| SMART | SM00220 | serkin_6 | 690 | 979 | 4.0E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 139 | 162 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 163 | 187 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 546 | 570 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 115 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 237 | 261 | 2.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 498 | 522 | 76.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 979 | 37.361122 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 826 | 838 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 696 | 719 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_031250637.1 | receptor-like protein kinase HSL1 [Pistacia vera] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | V4UQ05 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10007383mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology