Basic Information
Locus ID:
pistato.v30256680
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
proteinaceous RNase P 1, chloroplastic mitochondrial-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 5764945 | 5768827 | - | pistato.v30256680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.33 | 98,401.27 Da | 43.01 | 69.46 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 359 | 505 | 1.5E-54 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 188 | 247 | 7.0E-17 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 547 | 772 | 5.0E-73 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 564 | 738 | 8.8E-197 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 195 | 246 | 9.5E-13 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 357 | 775 | 8.8E-197 | IPR011990 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 418 | 452 | 8.944478 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 193 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 792 | 816 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 790 | 830 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 359 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_031258690.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Pistacia vera] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HZ11 | ribonuclease P OS=Acer yangbiense OX=1000413 GN=EZV62_012765 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology