Basic Information
Locus ID:
pistato.v30255560
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 4674376 | 4679694 | - | pistato.v30255560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.08 | 109,943.30 Da | 37.83 | 77.89 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 719 | 976 | 1.4317E-106 | - |
| Pfam | PF00564 | PB1 domain | 33 | 126 | 2.3E-9 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 713 | 976 | 1.3E-63 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 34 | 118 | 1.33E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 689 | 974 | 1.52E-76 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 35 | 129 | 4.1E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 706 | 800 | 5.5E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 801 | 985 | 1.8E-53 | - |
| SMART | SM00666 | PB1_new | 31 | 128 | 1.8E-15 | IPR000270 |
| SMART | SM00220 | serkin_6 | 713 | 979 | 6.0E-55 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 713 | 979 | 40.993561 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 719 | 740 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 838 | 850 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 903 | 925 | 5.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 832 | 850 | 5.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 947 | 969 | 5.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 795 | 808 | 5.4E-15 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 654 | 670 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 670 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57610.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_044471307.1 | uncharacterized protein LOC123200219 [Mangifera indica] | 0 |
| A0A2R6XIK6 | RAF-like serine/threonine-protein kinase PRAF OS=Marchantia polymorpha OX=3197 GN=PRAF PE=1 SV=1 | 0 | |
| TrEMBL | V4UDW8 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10010402mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology