Basic Information
Locus ID:
pistato.v30255080
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 4286476 | 4288770 | - | pistato.v30255080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 68,675.15 Da | 42.68 | 105.53 | 0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 559 | 577 | 0.27 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 240 | 263 | 3.5E-4 | IPR001611 |
| Pfam | PF00646 | F-box domain | 56 | 96 | 5.9E-4 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 479 | 501 | 1.6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 347 | 604 | 2.16E-37 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 50 | 93 | 5.1E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 175 | 414 | 1.02E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 450 | 644 | 1.3E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 241 | 449 | 1.6E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 136 | 240 | 1.2E-14 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 189 | 214 | 0.0051 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 453 | 478 | 0.036 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 267 | 292 | 0.21 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 506 | 531 | 30.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 373 | 398 | 0.036 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 585 | 610 | 12.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 241 | 266 | 3.1E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 347 | 372 | 0.28 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 215 | 240 | 1.8E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 399 | 424 | 27.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 479 | 504 | 0.35 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 559 | 583 | 11.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 533 | 558 | 0.19 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25350.1 | EIN3-binding F box protein 2. Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway. | 0 |
| RefSeq | XP_031271906.1 | EIN3-binding F-box protein 1-like [Pistacia vera] | 0 |
| Q708Y0 | EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067GXT3 | F-box domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g006749mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology