Basic Information
Locus ID:
pistato.v30254130
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 3461789 | 3466536 | + | pistato.v30254130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 121,961.05 Da | 43.52 | 98.66 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 694 | 972 | 2.7E-48 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 267 | 287 | 0.53 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 97 | 109 | 1.9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 70 | 1.1E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 528 | 586 | 1.0E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 683 | 976 | 4.99E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 394 | 596 | 3.23E-42 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 378 | 3.74E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 287 | 2.6E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 772 | 998 | 1.8E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 183 | 3.8E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 384 | 1.1E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 496 | 615 | 3.1E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 385 | 495 | 1.3E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 675 | 771 | 1.4E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 241 | 265 | 7.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 167 | 191 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 502 | 526 | 11.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 692 | 975 | 3.3E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 550 | 574 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 96 | 119 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 266 | 288 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 289 | 312 | 140.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 98 | 120 | 7.172906 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 692 | 983 | 37.417656 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 698 | 721 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 828 | 840 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_031283625.1 | receptor-like protein kinase 5 [Pistacia vera] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067GMK7 | Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g001706mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology