Basic Information
Locus ID:
pistato.v30254070
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 3412126 | 3418968 | + | pistato.v30254070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 155,113.56 Da | 42.30 | 102.54 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 488 | 548 | 7.6E-11 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 679 | 957 | 2.8E-48 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 70 | 7.9E-8 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 1233 | 1253 | 1.3 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 290 | 582 | 2.82E-43 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 363 | 1.29E-51 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1039 | 1252 | 7.14E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 668 | 961 | 1.25E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 1179 | 1394 | 2.95E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1042 | 1254 | 7.1E-52 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 757 | 981 | 3.7E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 320 | 610 | 6.9E-71 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 660 | 756 | 1.9E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 85 | 319 | 8.1E-63 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 84 | 2.7E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1255 | 1397 | 1.1E-37 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 96 | 127 | 160.0 | - |
| SMART | SM00369 | LRR_typ_2 | 241 | 265 | 6.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 535 | 559 | 26.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 1062 | 1093 | 190.0 | - |
| SMART | SM00369 | LRR_typ_2 | 289 | 312 | 140.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 1231 | 1251 | 34.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 167 | 193 | 82.0 | - |
| SMART | SM00369 | LRR_typ_2 | 1133 | 1152 | 270.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 1133 | 1159 | 24.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 241 | 270 | 150.0 | - |
| SMART | SM00220 | serkin_6 | 677 | 960 | 5.4E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 96 | 119 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 487 | 511 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1255 | 1278 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1207 | 1231 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 167 | 191 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1062 | 1085 | 110.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 98 | 120 | 7.134402 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 677 | 968 | 37.389389 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 1064 | 1086 | 7.172906 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 813 | 825 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 683 | 706 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_031275181.1 | receptor-like protein kinase 5 [Pistacia vera] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067GMK7 | Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g001706mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology