Basic Information
Locus ID:
pistato.v30252380
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 1956123 | 1959840 | + | pistato.v30252380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.83 | 86,964.01 Da | 55.81 | 80.96 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 20 | 177 | 1.95465E-61 | - |
| Pfam | PF00582 | Universal stress protein family | 21 | 166 | 1.3E-7 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 474 | 727 | 2.2E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 456 | 732 | 1.01E-66 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 21 | 174 | 1.17E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 546 | 748 | 1.3E-46 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 3 | 174 | 6.6E-10 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 450 | 545 | 4.6E-25 | - |
| SMART | SM00220 | serkin_6 | 473 | 733 | 1.0E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 473 | 736 | 35.19862 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 591 | 603 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 754 | 781 | - | - |
| Coils | Coil | Coil | 332 | 359 | - | - |
| Coils | Coil | Coil | 385 | 436 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_031255082.1 | U-box domain-containing protein 35 [Pistacia vera] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7I088 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_013772 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology