Basic Information
Locus ID:
pistato.v30252360
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 1946593 | 1949345 | + | pistato.v30252360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.24 | 69,510.94 Da | 32.84 | 85.89 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 187 | 209 | 0.25 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 327 | 593 | 9.0E-29 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 65 | 1.6E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 112 | 152 | 2.7E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 328 | 597 | 9.97E-50 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 24 | 226 | 1.4E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 137 | 230 | 2.7E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 136 | 9.2E-23 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 296 | 399 | 5.7E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 400 | 619 | 4.9E-40 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 116 | 138 | 7.00349 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 324 | 598 | 26.647549 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_031255173.1 | probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Pistacia vera] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HZ75 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_013770 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology