Basic Information
Locus ID:
pistato.v30250860
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 777547 | 787410 | + | pistato.v30250860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.24 | 99,032.45 Da | 48.87 | 61.84 | -0.99 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 636 | 680 | 7.21292E-4 | IPR002999 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 633 | 673 | 6.52E-8 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 47 | 258 | 7.2E-10 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 632 | 683 | 2.0E-12 | - |
| SMART | SM00333 | TUDOR_7 | 631 | 689 | 9.9E-5 | IPR002999 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 749 | 790 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 637 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 891 | 907 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 388 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 791 | 808 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 521 | 544 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 815 | 831 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 709 | 731 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 559 | 629 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 872 | 890 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 841 | 871 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 686 | 921 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_031279565.1 | nucleolar protein dao-5 [Pistacia vera] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | V4WB02 | Tudor domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10007391mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology