Basic Information
Locus ID:
pistato.v30250040
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 202165 | 205603 | + | pistato.v30250040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 69,040.11 Da | 42.38 | 104.55 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 246 | 269 | 0.17 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 273 | 295 | 1.5 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 354 | 375 | 0.8 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 485 | 507 | 0.15 | IPR001611 |
| Pfam | PF00646 | F-box domain | 68 | 109 | 6.4E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 185 | 646 | 7.38E-42 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 61 | 103 | 9.68E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 260 | 447 | 2.6E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 448 | 650 | 3.1E-34 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 58 | 105 | 1.7E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 165 | 259 | 1.3E-22 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 565 | 589 | 1.8 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 512 | 537 | 16.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 405 | 430 | 140.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 539 | 564 | 5.6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 273 | 298 | 5.3E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 247 | 272 | 7.7E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 221 | 246 | 2.7E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 195 | 220 | 0.075 | IPR006553 |
| SMART | SM00256 | fbox_2 | 69 | 110 | 0.004 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 485 | 510 | 0.0014 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 353 | 378 | 0.065 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 459 | 484 | 0.47 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 379 | 404 | 0.0019 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 591 | 616 | 0.98 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_031273824.1 | EIN3-binding F-box protein 1-like [Pistacia vera] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | V4UHK5 | F-box domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10007708mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology