Basic Information
Locus ID:
pistato.v30246810
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 31616477 | 31630783 | + | pistato.v30246810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.78 | 149,493.53 Da | 39.73 | 105.98 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01120 | RecA-like_NTPases | 292 | 406 | 9.38597E-7 | - |
| Pfam | PF00931 | NB-ARC domain | 279 | 499 | 8.6E-33 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 573 | 1151 | 1.31E-26 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 263 | 512 | 1.5E-41 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 834 | 1237 | 1.8E-16 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 423 | 500 | 6.3E-9 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 605 | 833 | 3.6E-29 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 261 | 421 | 4.1E-23 | IPR027417 |
| SMART | SM00382 | AAA_5 | 289 | 471 | 6.8E-4 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 365 | 379 | 2.1E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 716 | 732 | 2.1E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 292 | 307 | 2.1E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 445 | 459 | 2.1E-15 | - |
| Coils | Coil | Coil | 59 | 79 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12220.1 | Disease resistance protein (CC-NBS-LRR class) family. Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB. | 0 |
| RefSeq | XP_044465002.1 | uncharacterized protein LOC123195393 isoform X1 [Mangifera indica] | 0 |
| O64973 | Disease resistance protein RPS5 OS=Arabidopsis thaliana OX=3702 GN=RPS5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A067DZX6 | NB-ARC domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g042307mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology