Basic Information
Locus ID:
pistato.v30246800
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 31591758 | 31596490 | + | pistato.v30246800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 168,324.13 Da | 40.82 | 105.68 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 288 | 522 | 1.6E-38 | IPR002182 |
| SUPERFAMILY | SSF52047 | RNI-like | 898 | 1371 | 8.63E-13 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 598 | 1029 | 5.53E-26 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 273 | 536 | 2.63E-47 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 629 | 997 | 9.8E-34 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 275 | 433 | 2.3E-27 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 435 | 524 | 5.8E-13 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1212 | 1454 | 6.7E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1002 | 1211 | 7.2E-11 | IPR032675 |
| SMART | SM00382 | AAA_5 | 301 | 437 | 0.0018 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 304 | 319 | 1.1E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 377 | 391 | 1.1E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 744 | 760 | 1.1E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 469 | 483 | 1.1E-18 | - |
| Coils | Coil | Coil | 31 | 51 | - | - |
| Coils | Coil | Coil | 155 | 189 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_044481226.1 | uncharacterized protein LOC123207811 [Mangifera indica] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067DZX6 | NB-ARC domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g042307mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology