Basic Information
Locus ID:
pistato.v30246630
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 31177967 | 31193302 | - | pistato.v30246630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 229,263.63 Da | 36.23 | 101.52 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 156 | 286 | 0.00114412 | - |
| CDD | cd00009 | AAA | 1037 | 1167 | 0.00114412 | - |
| Pfam | PF00931 | NB-ARC domain | 161 | 392 | 5.6E-41 | IPR002182 |
| Pfam | PF00931 | NB-ARC domain | 1042 | 1273 | 5.6E-41 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1026 | 1287 | 2.3E-47 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 497 | 868 | 8.5E-25 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1385 | 1751 | 1.9E-24 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 145 | 406 | 2.3E-47 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 1839 | 1957 | 1.65E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1761 | 1972 | 1.3E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1382 | 1753 | 1.5E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 494 | 956 | 9.4E-34 | IPR032675 |
| Gene3D | G3DSA:1.20.5.4130 | - | 6 | 121 | 1.5E-5 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 140 | 301 | 3.1E-27 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 1186 | 1275 | 4.5E-14 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 1021 | 1182 | 3.1E-27 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 305 | 394 | 4.5E-14 | IPR042197 |
| SMART | SM00382 | AAA_5 | 171 | 324 | 5.8E-4 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1052 | 1205 | 5.8E-4 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 609 | 625 | 1.7E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 339 | 353 | 1.7E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 247 | 261 | 1.7E-19 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 174 | 189 | 1.7E-19 | - |
| Coils | Coil | Coil | 913 | 954 | - | - |
| Coils | Coil | Coil | 32 | 73 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031251803.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2MH75 | AAA domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS358158 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology