Basic Information
Locus ID:
pistato.v30246610
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 31171097 | 31177230 | - | pistato.v30246610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 162,939.39 Da | 43.00 | 107.09 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 171 | 404 | 3.4E-39 | IPR002182 |
| SUPERFAMILY | SSF52047 | RNI-like | 770 | 1072 | 4.71E-15 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 471 | 1224 | 1.02E-25 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 155 | 418 | 2.79E-48 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1088 | 1369 | 1.5E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 880 | 1087 | 5.0E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 500 | 662 | 3.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 665 | 879 | 8.5E-11 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 317 | 406 | 4.9E-14 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 157 | 315 | 2.9E-27 | IPR027417 |
| SMART | SM00382 | AAA_5 | 183 | 319 | 2.7E-4 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 351 | 365 | 1.0E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 259 | 273 | 1.0E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 186 | 201 | 1.0E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 617 | 633 | 1.0E-18 | - |
| Coils | Coil | Coil | 1010 | 1030 | - | - |
| Coils | Coil | Coil | 37 | 71 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_044465002.1 | uncharacterized protein LOC123195393 isoform X1 [Mangifera indica] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067DZX6 | NB-ARC domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g042307mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology