Basic Information
Locus ID:
pistato.v30246600
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the disease resistance NB-LRR family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 31125738 | 31127580 | - | pistato.v30246600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 46,239.94 Da | 31.61 | 100.15 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 117 | 340 | 2.7E-39 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 100 | 344 | 2.01E-42 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 98 | 259 | 4.3E-24 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 261 | 350 | 8.7E-15 | IPR042197 |
| SMART | SM00382 | AAA_5 | 127 | 321 | 1.6E-4 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 203 | 217 | 1.2E-11 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 130 | 145 | 1.2E-11 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 295 | 309 | 1.2E-11 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12220.1 | Disease resistance protein (CC-NBS-LRR class) family. Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB. | 0 |
| RefSeq | XP_044465712.1 | disease resistance protein At4g27190-like [Mangifera indica] | 0 |
| O23317 | Probable disease resistance protein At4g14610 OS=Arabidopsis thaliana OX=3702 GN=At4g14610 PE=3 SV=1 | 0 | |
| TrEMBL | V4T4Y4 | AAA domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v100000552mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology