Basic Information
Locus ID:
pistato.v30246520
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 30991743 | 30994824 | + | pistato.v30246520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 86,126.53 Da | 44.57 | 90.77 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 581 | 743 | 7.2E-34 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 573 | 743 | 1.26E-27 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 555 | 725 | 9.6E-26 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 671 | 685 | 9.6E-8 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 597 | 612 | 9.6E-8 | - |
| Coils | Coil | Coil | 76 | 107 | - | - |
| Coils | Coil | Coil | 462 | 503 | - | - |
| Coils | Coil | Coil | 34 | 61 | - | - |
| Coils | Coil | Coil | 257 | 312 | - | - |
| Coils | Coil | Coil | 347 | 395 | - | - |
| Coils | Coil | Coil | 170 | 197 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G43740.1 | Disease resistance protein (CC-NBS-LRR class) family. | 0 |
| RefSeq | XP_031285180.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| Q9FG90 | Probable disease resistance protein At5g43740 OS=Arabidopsis thaliana OX=3702 GN=At5g43740 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067E096 | NB-ARC domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0039961mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |