Basic Information
Locus ID:
pistato.v30243710
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Short Name:
CPK24
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 22411203 | 22415477 | - | pistato.v30243710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 64,273.54 Da | 36.84 | 83.90 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 79 | 340 | 1.96676E-131 | - |
| Pfam | PF00069 | Protein kinase domain | 80 | 341 | 3.9E-75 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 389 | 448 | 3.2E-9 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 461 | 523 | 2.5E-10 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 370 | 534 | 2.4E-38 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 70 | 357 | 4.86E-85 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 350 | 526 | 1.3E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 166 | 349 | 2.7E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 82 | 165 | 2.4E-28 | - |
| SMART | SM00220 | serkin_6 | 80 | 341 | 1.2E-97 | IPR000719 |
| SMART | SM00054 | efh_1 | 388 | 416 | 4.2E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 424 | 452 | 1.8 | IPR002048 |
| SMART | SM00054 | efh_1 | 497 | 525 | 8.8E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 460 | 488 | 0.0076 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 420 | 455 | 9.492233 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 493 | 528 | 13.481276 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 80 | 341 | 49.375023 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 384 | 419 | 14.290241 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 456 | 491 | 11.891237 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 506 | 518 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 200 | 212 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 469 | 481 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 433 | 445 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 397 | 409 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 86 | 109 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_031252143.1 | calcium-dependent protein kinase 24 [Pistacia vera] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5QUB2 | Calcium-dependent protein kinase 24 OS=Citrus unshiu OX=55188 GN=CUMW_262310 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology