Basic Information
Locus ID:
pistato.v30242690
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 18560490 | 18564734 | - | pistato.v30242690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 101,224.62 Da | 38.39 | 91.00 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 590 | 863 | 9.18638E-93 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 588 | 858 | 4.3E-49 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 91 | 147 | 1.6E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 63 | 1.5E-5 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 327 | 365 | 0.043 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 388 | 428 | 7.9E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 337 | 441 | 2.59E-17 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 561 | 860 | 1.62E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 319 | 2.38E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 327 | 450 | 1.5E-31 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 662 | 883 | 1.2E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 323 | 2.1E-72 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 548 | 661 | 7.9E-36 | - |
| SMART | SM00369 | LRR_typ_2 | 415 | 437 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 391 | 414 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 112 | 135 | 0.084 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 186 | 209 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 136 | 157 | 230.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 584 | 864 | 1.6E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 584 | 864 | 41.149033 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 709 | 721 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 590 | 612 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 907 | 932 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_031265062.1 | receptor-like kinase TMK4 [Pistacia vera] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5PN92 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_150120 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology