Basic Information
Locus ID:
pistato.v30242510
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 18054881 | 18063364 | - | pistato.v30242510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 156,569.45 Da | 40.96 | 105.22 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 165 | 269 | 0.00400714 | - |
| Pfam | PF00931 | NB-ARC domain | 168 | 364 | 3.3E-27 | IPR002182 |
| SUPERFAMILY | SSF52047 | RNI-like | 863 | 1059 | 4.39E-10 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 163 | 401 | 1.62E-32 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 1081 | 1275 | 6.97E-5 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 436 | 1269 | 2.24E-21 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 149 | 328 | 3.8E-27 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 483 | 997 | 1.0E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1017 | 1194 | 2.1E-11 | IPR032675 |
| SMART | SM00382 | AAA_5 | 178 | 326 | 0.0043 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 587 | 603 | 1.3E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 181 | 196 | 1.3E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 254 | 268 | 1.3E-16 | - |
| Coils | Coil | Coil | 39 | 73 | - | - |
| Coils | Coil | Coil | 723 | 743 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031272218.1 | uncharacterized protein LOC116130624 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HQ50 | AAA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_016990 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology